So after playing around with the screens a bit more, it seems that the visible editing screen is not set at a particular resolution so it won't show the true layout until it is displayed on the appropriate screen.
I was able to manually change the X-Y coordinates, as you mentioned in the last post to put it in the right place, half blindly. I refreshed the page with every change. Eventually I got it in the right position.
However, if using docked layout containers, it shows up as it would on the final screen.